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Data X:
8.1 7.7 8.5 8.2 7.8 8.6 8 7.7 8.5 8.1 7.7 8.5 8.3 7.7 9 8.2 7.7 9 8.1 7.6 8.8 7.7 7.5 8 7.6 7.4 7.9 7.7 7.4 8.1 8.2 7.5 9.3 8.4 7.6 9.4 8.4 7.6 9.4 8.6 8.1 9.3 8.4 7.8 9 8.5 8 9.1 8.7 7.9 9.7 8.7 7.9 9.7 8.6 7.8 9.6 7.4 6.7 8.3 7.3 6.6 8.2 7.4 6.6 8.4 9 7.7 10.6 9.2 7.9 10.9 9.2 8 10.9 8.5 7.7 9.6 8.3 7.5 9.3 8.3 7.6 9.3 8.6 7.8 9.6 8.6 7.8 9.5 8.5 7.7 9.5 8.1 7.4 9 8.1 7.5 8.9 8 7.2 9 8.6 7.5 10.1 8.7 7.6 10.2 8.7 7.6 10.2 8.6 7.8 9.5 8.4 7.7 9.3 8.4 7.7 9.3 8.7 8.2 9.4 8.7 8.2 9.3 8.5 8.1 9.1 8.3 7.8 9 8.3 7.8 8.9 8.3 7.7 9 8.1 6.7 9.8 8.2 6.7 10 8.1 6.7 9.8 8.1 7.2 9.4 7.9 6.9 9 7.7 6.8 8.9 8.1 7.2 9.3 8 7.1 9.1 7.7 6.9 8.8 7.8 6.9 8.9 7.6 6.7 8.7 7.4 6.5 8.6 7.7 6.6 9.1 7.9 6.6 9.3 7.6 6.5 8.9
Names of X columns:
man vrouw totaal
Method
complete
ward
single
complete
average
mcquitty
median
centroid
# of (top) clusters to display
ALL
ALL
2
3
4
5
6
7
8
9
10
15
20
Horizontal
FALSE
FALSE
TRUE
Triangle
FALSE
FALSE
TRUE
Chart options
Title:
Label y-axis:
Label x-axis:
R Code
par3 <- as.logical(par3) par4 <- as.logical(par4) if (par3 == 'TRUE'){ dum = xlab xlab = ylab ylab = dum } x <- t(y) hc <- hclust(dist(x),method=par1) d <- as.dendrogram(hc) str(d) mysub <- paste('Method: ',par1) bitmap(file='test1.png') if (par4 == 'TRUE'){ plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub) } else { plot(d,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub) } dev.off() if (par2 != 'ALL'){ if (par3 == 'TRUE'){ ylab = 'cluster' } else { xlab = 'cluster' } par2 <- as.numeric(par2) memb <- cutree(hc, k = par2) cent <- NULL for(k in 1:par2){ cent <- rbind(cent, colMeans(x[memb == k, , drop = FALSE])) } hc1 <- hclust(dist(cent),method=par1, members = table(memb)) de <- as.dendrogram(hc1) bitmap(file='test2.png') if (par4 == 'TRUE'){ plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8),type='t',center=T, sub=mysub) } else { plot(de,main=main,ylab=ylab,xlab=xlab,horiz=par3, nodePar=list(pch = c(1,NA), cex=0.8, lab.cex = 0.8), sub=mysub) } dev.off() str(de) } load(file='createtable') a<-table.start() a<-table.row.start(a) a<-table.element(a,'Summary of Dendrogram',2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Label',header=TRUE) a<-table.element(a,'Height',header=TRUE) a<-table.row.end(a) num <- length(x[,1])-1 for (i in 1:num) { a<-table.row.start(a) a<-table.element(a,hc$labels[i]) a<-table.element(a,hc$height[i]) a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable1.tab') if (par2 != 'ALL'){ a<-table.start() a<-table.row.start(a) a<-table.element(a,'Summary of Cut Dendrogram',2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Label',header=TRUE) a<-table.element(a,'Height',header=TRUE) a<-table.row.end(a) num <- par2-1 for (i in 1:num) { a<-table.row.start(a) a<-table.element(a,i) a<-table.element(a,hc1$height[i]) a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable2.tab') }
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