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Data X:
33024 31086 19828 18932 32526 30839 19967 18927 31455 30051 19814 19124 31524 29976 20053 19066 31856 30463 20719 19971 32696 31422 21174 20165 32584 31588 20648 19705 33498 31900 20659 19718 34175 32878 20733 19938 34172 33010 21069 20039 34379 32954 20566 19721 34988 33076 20839 19777 36158 35057 21615 20505 37411 35906 22739 21763 38015 36100 23222 22404 37577 35824 23031 22038 36354 34579 23014 22038 36030 34484 22868 21874 35636 33920 22182 21269 35669 34059 22177 21127 34635 33812 21216 20609 35496 34594 21031 20565 36376 36083 20968 19791 37635 36563 21049 20672 38875 37416 21033 20938 38372 37953 21078 20675 38897 37517 20702 19992 38018 37467 20309 19801 37325 36963 20449 20050 36893 36019 20737 20427 36117 35232 20849 20815 37599 36857 21966 21666 39037 37978 23100 22720 40809 40160 23975 23650 42508 42165 24350 24244 44021 43069 24020 23669 44088 43021 24005 23881 44510 43376 23602 23857 45786 43978 24120 23999 47349 45911 24847 24780 48696 47107 25702 25426 50598 49168 26312 26229 50066 48390 25891 25973 49367 47678 25172 25375 48784 47822 25698 25966 47841 46695 25833 25391 48300 47185 25658 26046 47518 45684 25269 25572 46504 44884 24846 24900 45147 44256 24390 24744 44404 43637 23954 24526 43455 42368 23828 24274 42299 40892 23507 23774 42105 40616 23144 23414 40152 39026 22302 23002 39519 38921 23028 23137 39633 38512 22741 22947 39376 38884 23129 23733 38850 38406 22911 23234 39657 38804 22071 22969 34804 34871 16466 17708 34372 34660 16370 17377 32678 33104 15049 16273 28420 28952 13174 14342 25420 26488 12231 13522 27683 29418 13620 15210 29904 32315 14317 16493 30546 32885 14039 16701 29142 31565 13526 15662 27724 30782 12826 15526 27069 30442 12360 15413 26665 30851 12592 15805 26004 30432 12381 15802 25767 31260 12554 16753 24915 30737 12338 16906 23689 30129 11768 16891 20915 27672 10687 15703 19414 26469 9964 15429 17824 24895 9338 14762 16348 24427 8697 14426 15571 23252 8068 14250 13929 21815 7295 13267 12480 20837 6372 12397 10837 18537 5649 11586 9473 17237 4926 10888 8051 15476 4199 9841 5278 10709 2568 6443 3008 6776 1461 4019 2404 5810 1173 3449 2298 5765 1084 3179 2260 5775 978 3341 1938 5589 947 3325 1371 4687 679 2478 1009 3630 457 1982 686 2552 262 1405 493 1928 218 1059 285 1323 132 740 192 1005 70 533 129 678 44 366 60 397 24 224 54 286 20 147 26 166 4 75 11 80 4 54 3 53 1 23 0 32 0 16 2 11 0 6 1 6 0 7 0 4 0 2 0 2 0 0 0 0 0 0 0 1 0 0
Names of X columns:
MVG VVG MWG VWG
Endogenous Variable (Column Number)
Categorization
none
none
quantiles
hclust
equal
Number of categories (only if categorization<>none)
Cross-Validation? (only if categorization<>none)
no
no
yes
Chart options
R Code
library(party) library(Hmisc) par1 <- as.numeric(par1) par3 <- as.numeric(par3) x <- data.frame(t(y)) is.data.frame(x) x <- x[!is.na(x[,par1]),] k <- length(x[1,]) n <- length(x[,1]) colnames(x)[par1] x[,par1] if (par2 == 'kmeans') { cl <- kmeans(x[,par1], par3) print(cl) clm <- matrix(cbind(cl$centers,1:par3),ncol=2) clm <- clm[sort.list(clm[,1]),] for (i in 1:par3) { cl$cluster[cl$cluster==clm[i,2]] <- paste('C',i,sep='') } cl$cluster <- as.factor(cl$cluster) print(cl$cluster) x[,par1] <- cl$cluster } if (par2 == 'quantiles') { x[,par1] <- cut2(x[,par1],g=par3) } if (par2 == 'hclust') { hc <- hclust(dist(x[,par1])^2, 'cen') print(hc) memb <- cutree(hc, k = par3) dum <- c(mean(x[memb==1,par1])) for (i in 2:par3) { dum <- c(dum, mean(x[memb==i,par1])) } hcm <- matrix(cbind(dum,1:par3),ncol=2) hcm <- hcm[sort.list(hcm[,1]),] for (i in 1:par3) { memb[memb==hcm[i,2]] <- paste('C',i,sep='') } memb <- as.factor(memb) print(memb) x[,par1] <- memb } if (par2=='equal') { ed <- cut(as.numeric(x[,par1]),par3,labels=paste('C',1:par3,sep='')) x[,par1] <- as.factor(ed) } table(x[,par1]) colnames(x) colnames(x)[par1] x[,par1] if (par2 == 'none') { m <- ctree(as.formula(paste(colnames(x)[par1],' ~ .',sep='')),data = x) } load(file='createtable') if (par2 != 'none') { m <- ctree(as.formula(paste('as.factor(',colnames(x)[par1],') ~ .',sep='')),data = x) if (par4=='yes') { a<-table.start() a<-table.row.start(a) a<-table.element(a,'10-Fold Cross Validation',3+2*par3,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'',1,TRUE) a<-table.element(a,'Prediction (training)',par3+1,TRUE) a<-table.element(a,'Prediction (testing)',par3+1,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Actual',1,TRUE) for (jjj in 1:par3) a<-table.element(a,paste('C',jjj,sep=''),1,TRUE) a<-table.element(a,'CV',1,TRUE) for (jjj in 1:par3) a<-table.element(a,paste('C',jjj,sep=''),1,TRUE) a<-table.element(a,'CV',1,TRUE) a<-table.row.end(a) for (i in 1:10) { ind <- sample(2, nrow(x), replace=T, prob=c(0.9,0.1)) m.ct <- ctree(as.formula(paste('as.factor(',colnames(x)[par1],') ~ .',sep='')),data =x[ind==1,]) if (i==1) { m.ct.i.pred <- predict(m.ct, newdata=x[ind==1,]) m.ct.i.actu <- x[ind==1,par1] m.ct.x.pred <- predict(m.ct, newdata=x[ind==2,]) m.ct.x.actu <- x[ind==2,par1] } else { m.ct.i.pred <- c(m.ct.i.pred,predict(m.ct, newdata=x[ind==1,])) m.ct.i.actu <- c(m.ct.i.actu,x[ind==1,par1]) m.ct.x.pred <- c(m.ct.x.pred,predict(m.ct, newdata=x[ind==2,])) m.ct.x.actu <- c(m.ct.x.actu,x[ind==2,par1]) } } print(m.ct.i.tab <- table(m.ct.i.actu,m.ct.i.pred)) numer <- 0 for (i in 1:par3) { print(m.ct.i.tab[i,i] / sum(m.ct.i.tab[i,])) numer <- numer + m.ct.i.tab[i,i] } print(m.ct.i.cp <- numer / sum(m.ct.i.tab)) print(m.ct.x.tab <- table(m.ct.x.actu,m.ct.x.pred)) numer <- 0 for (i in 1:par3) { print(m.ct.x.tab[i,i] / sum(m.ct.x.tab[i,])) numer <- numer + m.ct.x.tab[i,i] } print(m.ct.x.cp <- numer / sum(m.ct.x.tab)) for (i in 1:par3) { a<-table.row.start(a) a<-table.element(a,paste('C',i,sep=''),1,TRUE) for (jjj in 1:par3) a<-table.element(a,m.ct.i.tab[i,jjj]) a<-table.element(a,round(m.ct.i.tab[i,i]/sum(m.ct.i.tab[i,]),4)) for (jjj in 1:par3) a<-table.element(a,m.ct.x.tab[i,jjj]) a<-table.element(a,round(m.ct.x.tab[i,i]/sum(m.ct.x.tab[i,]),4)) a<-table.row.end(a) } a<-table.row.start(a) a<-table.element(a,'Overall',1,TRUE) for (jjj in 1:par3) a<-table.element(a,'-') a<-table.element(a,round(m.ct.i.cp,4)) for (jjj in 1:par3) a<-table.element(a,'-') a<-table.element(a,round(m.ct.x.cp,4)) a<-table.row.end(a) a<-table.end(a) table.save(a,file='mytable3.tab') } } m bitmap(file='test1.png') plot(m) dev.off() bitmap(file='test1a.png') plot(x[,par1] ~ as.factor(where(m)),main='Response by Terminal Node',xlab='Terminal Node',ylab='Response') dev.off() if (par2 == 'none') { forec <- predict(m) result <- as.data.frame(cbind(x[,par1],forec,x[,par1]-forec)) colnames(result) <- c('Actuals','Forecasts','Residuals') print(result) } if (par2 != 'none') { print(cbind(as.factor(x[,par1]),predict(m))) myt <- table(as.factor(x[,par1]),predict(m)) print(myt) } bitmap(file='test2.png') if(par2=='none') { op <- par(mfrow=c(2,2)) plot(density(result$Actuals),main='Kernel Density Plot of Actuals') plot(density(result$Residuals),main='Kernel Density Plot of Residuals') plot(result$Forecasts,result$Actuals,main='Actuals versus Predictions',xlab='Predictions',ylab='Actuals') plot(density(result$Forecasts),main='Kernel Density Plot of Predictions') par(op) } if(par2!='none') { plot(myt,main='Confusion Matrix',xlab='Actual',ylab='Predicted') } dev.off() if (par2 == 'none') { detcoef <- cor(result$Forecasts,result$Actuals) a<-table.start() a<-table.row.start(a) a<-table.element(a,'Goodness of Fit',2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Correlation',1,TRUE) a<-table.element(a,round(detcoef,4)) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'R-squared',1,TRUE) a<-table.element(a,round(detcoef*detcoef,4)) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'RMSE',1,TRUE) a<-table.element(a,round(sqrt(mean((result$Residuals)^2)),4)) a<-table.row.end(a) a<-table.end(a) table.save(a,file='mytable1.tab') a<-table.start() a<-table.row.start(a) a<-table.element(a,'Actuals, Predictions, and Residuals',4,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'#',header=TRUE) a<-table.element(a,'Actuals',header=TRUE) a<-table.element(a,'Forecasts',header=TRUE) a<-table.element(a,'Residuals',header=TRUE) a<-table.row.end(a) for (i in 1:length(result$Actuals)) { a<-table.row.start(a) a<-table.element(a,i,header=TRUE) a<-table.element(a,result$Actuals[i]) a<-table.element(a,result$Forecasts[i]) a<-table.element(a,result$Residuals[i]) a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable.tab') } if (par2 != 'none') { a<-table.start() a<-table.row.start(a) a<-table.element(a,'Confusion Matrix (predicted in columns / actuals in rows)',par3+1,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'',1,TRUE) for (i in 1:par3) { a<-table.element(a,paste('C',i,sep=''),1,TRUE) } a<-table.row.end(a) for (i in 1:par3) { a<-table.row.start(a) a<-table.element(a,paste('C',i,sep=''),1,TRUE) for (j in 1:par3) { a<-table.element(a,myt[i,j]) } a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable2.tab') }
Compute
Summary of computational transaction
Raw Input
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Raw Output
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Computing time
2 seconds
R Server
Big Analytics Cloud Computing Center
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