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Data X:
96 14 91 13 108 16 95 13 105 14 117 15 94 14 98 13 120 15 91 13 100 13 90 13 123 16 97 16 120 12 133 15 141 16 138 16 85 12 121 16 74 13 100 14 67 11 73 12 116 15 115 15 92 14 109 15 120 15 105 15 115 16 105 15 122 16 87 12 94 16 78 12 135 18 113 18 123 15 126 17 127 17 120 16 108 14 83 14 117 15 96 14 103 14 134 17 112 15 93 14 103 15 84 14 116 15 97 15 87 14 122 15 111 14 101 16 109 15 96 15 100 14 90 16 120 16 86 13 85 13 96 15 93 14 95 13 127 17 156 18 94 13 123 16 80 13 98 15 88 15 109 13 98 14 83 14 85 14 85 15 76 12 96 16 72 13 125 15 121 16 103 14 113 17 89 12 108 16 80 13 87 13 84 14 93 14 94 13 87 15 95 15 106 15 94 12
Names of X columns:
Cholesterol Bloeddruk
Column number of first sample
Column number of second sample
Confidence
Alternative
two.sided
two.sided
less
greater
Are observations paired?
paired
unpaired
paired
Null Hypothesis
Chart options
Title:
R Code
par1 <- as.numeric(par1) #column number of first sample par2 <- as.numeric(par2) #column number of second sample par3 <- as.numeric(par3) #confidence (= 1 - alpha) if (par5 == 'unpaired') paired <- FALSE else paired <- TRUE par6 <- as.numeric(par6) #H0 z <- t(y) if (par1 == par2) stop('Please, select two different column numbers') if (par1 < 1) stop('Please, select a column number greater than zero for the first sample') if (par2 < 1) stop('Please, select a column number greater than zero for the second sample') if (par1 > length(z[1,])) stop('The column number for the first sample should be smaller') if (par2 > length(z[1,])) stop('The column number for the second sample should be smaller') if (par3 <= 0) stop('The confidence level should be larger than zero') if (par3 >= 1) stop('The confidence level should be smaller than zero') (r.t <- t.test(z[,par1],z[,par2],var.equal=TRUE,alternative=par4,paired=paired,mu=par6,conf.level=par3)) (v.t <- var.test(z[,par1],z[,par2],conf.level=par3)) (r.w <- t.test(z[,par1],z[,par2],var.equal=FALSE,alternative=par4,paired=paired,mu=par6,conf.level=par3)) (w.t <- wilcox.test(z[,par1],z[,par2],alternative=par4,paired=paired,mu=par6,conf.level=par3)) (ks.t <- ks.test(z[,par1],z[,par2],alternative=par4)) m1 <- mean(z[,par1],na.rm=T) m2 <- mean(z[,par2],na.rm=T) mdiff <- m1 - m2 newsam1 <- z[!is.na(z[,par1]),par1] newsam2 <- z[,par2]+mdiff newsam2 <- newsam2[!is.na(newsam2)] (ks1.t <- ks.test(newsam1,newsam2,alternative=par4)) mydf <- data.frame(cbind(z[,par1],z[,par2])) colnames(mydf) <- c('Variable 1','Variable 2') bitmap(file='test1.png') boxplot(mydf, notch=TRUE, ylab='value',main=main) dev.off() bitmap(file='test2.png') qqnorm(z[,par1],main='Normal QQplot - Variable 1') qqline(z[,par1]) dev.off() bitmap(file='test3.png') qqnorm(z[,par2],main='Normal QQplot - Variable 2') qqline(z[,par2]) dev.off() load(file='createtable') a<-table.start() a<-table.row.start(a) a<-table.element(a,paste('Two Sample t-test (',par5,')',sep=''),2,TRUE) a<-table.row.end(a) if(!paired){ a<-table.row.start(a) a<-table.element(a,'Mean of Sample 1',header=TRUE) a<-table.element(a,r.t$estimate[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Mean of Sample 2',header=TRUE) a<-table.element(a,r.t$estimate[[2]]) a<-table.row.end(a) } else { a<-table.row.start(a) a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE) a<-table.element(a,r.t$estimate) a<-table.row.end(a) } a<-table.row.start(a) a<-table.element(a,'t-stat',header=TRUE) a<-table.element(a,r.t$statistic[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'df',header=TRUE) a<-table.element(a,r.t$parameter[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=TRUE) a<-table.element(a,r.t$p.value) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'H0 value',header=TRUE) a<-table.element(a,r.t$null.value[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Alternative',header=TRUE) a<-table.element(a,r.t$alternative) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'CI Level',header=TRUE) a<-table.element(a,attr(r.t$conf.int,'conf.level')) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'CI',header=TRUE) a<-table.element(a,paste('[',r.t$conf.int[1],',',r.t$conf.int[2],']',sep='')) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'F-test to compare two variances',2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'F-stat',header=TRUE) a<-table.element(a,v.t$statistic[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'df',header=TRUE) a<-table.element(a,v.t$parameter[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=TRUE) a<-table.element(a,v.t$p.value) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'H0 value',header=TRUE) a<-table.element(a,v.t$null.value[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Alternative',header=TRUE) a<-table.element(a,v.t$alternative) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'CI Level',header=TRUE) a<-table.element(a,attr(v.t$conf.int,'conf.level')) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'CI',header=TRUE) a<-table.element(a,paste('[',v.t$conf.int[1],',',v.t$conf.int[2],']',sep='')) a<-table.row.end(a) a<-table.end(a) table.save(a,file='mytable.tab') a<-table.start() a<-table.row.start(a) a<-table.element(a,paste('Welch Two Sample t-test (',par5,')',sep=''),2,TRUE) a<-table.row.end(a) if(!paired){ a<-table.row.start(a) a<-table.element(a,'Mean of Sample 1',header=TRUE) a<-table.element(a,r.w$estimate[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Mean of Sample 2',header=TRUE) a<-table.element(a,r.w$estimate[[2]]) a<-table.row.end(a) } else { a<-table.row.start(a) a<-table.element(a,'Difference: Mean1 - Mean2',header=TRUE) a<-table.element(a,r.w$estimate) a<-table.row.end(a) } a<-table.row.start(a) a<-table.element(a,'t-stat',header=TRUE) a<-table.element(a,r.w$statistic[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'df',header=TRUE) a<-table.element(a,r.w$parameter[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=TRUE) a<-table.element(a,r.w$p.value) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'H0 value',header=TRUE) a<-table.element(a,r.w$null.value[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Alternative',header=TRUE) a<-table.element(a,r.w$alternative) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'CI Level',header=TRUE) a<-table.element(a,attr(r.w$conf.int,'conf.level')) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'CI',header=TRUE) a<-table.element(a,paste('[',r.w$conf.int[1],',',r.w$conf.int[2],']',sep='')) a<-table.row.end(a) a<-table.end(a) table.save(a,file='mytable1.tab') a<-table.start() a<-table.row.start(a) a<-table.element(a,paste('Wicoxon rank sum test with continuity correction (',par5,')',sep=''),2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'W',header=TRUE) a<-table.element(a,w.t$statistic[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=TRUE) a<-table.element(a,w.t$p.value) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'H0 value',header=TRUE) a<-table.element(a,w.t$null.value[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Alternative',header=TRUE) a<-table.element(a,w.t$alternative) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Kolmogorov-Smirnov Test to compare <i>Distributions</i> of two Samples',2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'KS Statistic',header=TRUE) a<-table.element(a,ks.t$statistic[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=TRUE) a<-table.element(a,ks.t$p.value) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Kolmogorov-Smirnov Test to compare <i>Distributional Shape</i> of two Samples',2,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'KS Statistic',header=TRUE) a<-table.element(a,ks1.t$statistic[[1]]) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'p-value',header=TRUE) a<-table.element(a,ks1.t$p.value) a<-table.row.end(a) a<-table.end(a) table.save(a,file='mytable2.tab')
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Big Analytics Cloud Computing Center
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