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Data:
67 61 113 61 43 105 63 64 69 60 59 71 66 65 76 64 41 106 52 62 49 106 75 54 63 48 64 65 69 31 51 52 78 72 80 53 69 61 52 82 100 73 71 62 80 85 65 59 78 92 89 82 83 79 80 50 40 58 56 52 55 59 45 77 48 46 41 35 47 47 26 39 33 40 43 41 24 41 25 22 36 24 27 36 27 27 39 35 29 28 29 23 27 36 35 30 19 22 23 21 34 32 24 22 17 26 19
Include mean?
FALSE
FALSE
TRUE
Box-Cox lambda transformation parameter (lambda)
-0.3
1
-2.0
-1.9
-1.8
-1.7
-1.6
-1.5
-1.4
-1.3
-1.2
-1.1
-1.0
-0.9
-0.8
-0.7
-0.6
-0.5
-0.4
-0.3
-0.2
-0.1
0.0
0.1
0.2
0.3
0.4
0.5
0.6
0.7
0.8
0.9
1.0
1.1
1.2
1.3
1.4
1.5
1.6
1.7
1.8
1.9
2.0
Degree of non-seasonal differencing (d)
1
0
1
2
Degree of seasonal differencing (D)
0
0
1
Seasonal Period (s)
12
1
2
3
4
6
12
Maximum AR(p) order
3
0
1
2
3
Maximum MA(q) order
1
0
1
Maximum SAR(P) order
2
0
1
2
Maximum SMA(Q) order
1
0
1
Chart options
R Code
library(lattice) if (par1 == 'TRUE') par1 <- TRUE if (par1 == 'FALSE') par1 <- FALSE par2 <- as.numeric(par2) #Box-Cox lambda transformation parameter par3 <- as.numeric(par3) #degree of non-seasonal differencing par4 <- as.numeric(par4) #degree of seasonal differencing par5 <- as.numeric(par5) #seasonal period par6 <- as.numeric(par6) #degree (p) of the non-seasonal AR(p) polynomial par7 <- as.numeric(par7) #degree (q) of the non-seasonal MA(q) polynomial par8 <- as.numeric(par8) #degree (P) of the seasonal AR(P) polynomial par9 <- as.numeric(par9) #degree (Q) of the seasonal MA(Q) polynomial armaGR <- function(arima.out, names, n){ try1 <- arima.out$coef try2 <- sqrt(diag(arima.out$var.coef)) try.data.frame <- data.frame(matrix(NA,ncol=4,nrow=length(names))) dimnames(try.data.frame) <- list(names,c('coef','std','tstat','pv')) try.data.frame[,1] <- try1 for(i in 1:length(try2)) try.data.frame[which(rownames(try.data.frame)==names(try2)[i]),2] <- try2[i] try.data.frame[,3] <- try.data.frame[,1] / try.data.frame[,2] try.data.frame[,4] <- round((1-pt(abs(try.data.frame[,3]),df=n-(length(try2)+1)))*2,5) vector <- rep(NA,length(names)) vector[is.na(try.data.frame[,4])] <- 0 maxi <- which.max(try.data.frame[,4]) continue <- max(try.data.frame[,4],na.rm=TRUE) > .05 vector[maxi] <- 0 list(summary=try.data.frame,next.vector=vector,continue=continue) } arimaSelect <- function(series, order=c(13,0,0), seasonal=list(order=c(2,0,0),period=12), include.mean=F){ nrc <- order[1]+order[3]+seasonal$order[1]+seasonal$order[3] coeff <- matrix(NA, nrow=nrc*2, ncol=nrc) pval <- matrix(NA, nrow=nrc*2, ncol=nrc) mylist <- rep(list(NULL), nrc) names <- NULL if(order[1] > 0) names <- paste('ar',1:order[1],sep='') if(order[3] > 0) names <- c( names , paste('ma',1:order[3],sep='') ) if(seasonal$order[1] > 0) names <- c(names, paste('sar',1:seasonal$order[1],sep='')) if(seasonal$order[3] > 0) names <- c(names, paste('sma',1:seasonal$order[3],sep='')) arima.out <- arima(series, order=order, seasonal=seasonal, include.mean=include.mean, method='ML') mylist[[1]] <- arima.out last.arma <- armaGR(arima.out, names, length(series)) mystop <- FALSE i <- 1 coeff[i,] <- last.arma[[1]][,1] pval [i,] <- last.arma[[1]][,4] i <- 2 aic <- arima.out$aic while(!mystop){ mylist[[i]] <- arima.out arima.out <- arima(series, order=order, seasonal=seasonal, include.mean=include.mean, method='ML', fixed=last.arma$next.vector) aic <- c(aic, arima.out$aic) last.arma <- armaGR(arima.out, names, length(series)) mystop <- !last.arma$continue coeff[i,] <- last.arma[[1]][,1] pval [i,] <- last.arma[[1]][,4] i <- i+1 } list(coeff, pval, mylist, aic=aic) } arimaSelectplot <- function(arimaSelect.out,noms,choix){ noms <- names(arimaSelect.out[[3]][[1]]$coef) coeff <- arimaSelect.out[[1]] k <- min(which(is.na(coeff[,1])))-1 coeff <- coeff[1:k,] pval <- arimaSelect.out[[2]][1:k,] aic <- arimaSelect.out$aic[1:k] coeff[coeff==0] <- NA n <- ncol(coeff) if(missing(choix)) choix <- k layout(matrix(c(1,1,1,2, 3,3,3,2, 3,3,3,4, 5,6,7,7),nr=4), widths=c(10,35,45,15), heights=c(30,30,15,15)) couleurs <- rainbow(75)[1:50]#(50) ticks <- pretty(coeff) par(mar=c(1,1,3,1)) plot(aic,k:1-.5,type='o',pch=21,bg='blue',cex=2,axes=F,lty=2,xpd=NA) points(aic[choix],k-choix+.5,pch=21,cex=4,bg=2,xpd=NA) title('aic',line=2) par(mar=c(3,0,0,0)) plot(0,axes=F,xlab='',ylab='',xlim=range(ticks),ylim=c(.1,1)) rect(xleft = min(ticks) + (0:49)/50*(max(ticks)-min(ticks)), xright = min(ticks) + (1:50)/50*(max(ticks)-min(ticks)), ytop = rep(1,50), ybottom= rep(0,50),col=couleurs,border=NA) axis(1,ticks) rect(xleft=min(ticks),xright=max(ticks),ytop=1,ybottom=0) text(mean(coeff,na.rm=T),.5,'coefficients',cex=2,font=2) par(mar=c(1,1,3,1)) image(1:n,1:k,t(coeff[k:1,]),axes=F,col=couleurs,zlim=range(ticks)) for(i in 1:n) for(j in 1:k) if(!is.na(coeff[j,i])) { if(pval[j,i]<.01) symb = 'green' else if( (pval[j,i]<.05) & (pval[j,i]>=.01)) symb = 'orange' else if( (pval[j,i]<.1) & (pval[j,i]>=.05)) symb = 'red' else symb = 'black' polygon(c(i+.5 ,i+.2 ,i+.5 ,i+.5), c(k-j+0.5,k-j+0.5,k-j+0.8,k-j+0.5), col=symb) if(j==choix) { rect(xleft=i-.5, xright=i+.5, ybottom=k-j+1.5, ytop=k-j+.5, lwd=4) text(i, k-j+1, round(coeff[j,i],2), cex=1.2, font=2) } else{ rect(xleft=i-.5,xright=i+.5,ybottom=k-j+1.5,ytop=k-j+.5) text(i,k-j+1,round(coeff[j,i],2),cex=1.2,font=1) } } axis(3,1:n,noms) par(mar=c(0.5,0,0,0.5)) plot(0,axes=F,xlab='',ylab='',type='n',xlim=c(0,8),ylim=c(-.2,.8)) cols <- c('green','orange','red','black') niv <- c('0','0.01','0.05','0.1') for(i in 0:3){ polygon(c(1+2*i ,1+2*i ,1+2*i-.5 ,1+2*i), c(.4 ,.7 , .4 , .4), col=cols[i+1]) text(2*i,0.5,niv[i+1],cex=1.5) } text(8,.5,1,cex=1.5) text(4,0,'p-value',cex=2) box() residus <- arimaSelect.out[[3]][[choix]]$res par(mar=c(1,2,4,1)) acf(residus,main='') title('acf',line=.5) par(mar=c(1,2,4,1)) pacf(residus,main='') title('pacf',line=.5) par(mar=c(2,2,4,1)) qqnorm(residus,main='') title('qq-norm',line=.5) qqline(residus) residus } if (par2 == 0) x <- log(x) if (par2 != 0) x <- x^par2 (selection <- arimaSelect(x, order=c(par6,par3,par7), seasonal=list(order=c(par8,par4,par9), period=par5))) bitmap(file='test1.png') resid <- arimaSelectplot(selection) dev.off() resid bitmap(file='test2.png') acf(resid,length(resid)/2, main='Residual Autocorrelation Function') dev.off() bitmap(file='test3.png') pacf(resid,length(resid)/2, main='Residual Partial Autocorrelation Function') dev.off() bitmap(file='test4.png') cpgram(resid, main='Residual Cumulative Periodogram') dev.off() bitmap(file='test5.png') hist(resid, main='Residual Histogram', xlab='values of Residuals') dev.off() bitmap(file='test6.png') densityplot(~resid,col='black',main='Residual Density Plot', xlab='values of Residuals') dev.off() bitmap(file='test7.png') qqnorm(resid, main='Residual Normal Q-Q Plot') qqline(resid) dev.off() ncols <- length(selection[[1]][1,]) nrows <- length(selection[[2]][,1])-1 load(file='createtable') a<-table.start() a<-table.row.start(a) a<-table.element(a,'ARIMA Parameter Estimation and Backward Selection', ncols+1,TRUE) a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'Iteration', header=TRUE) for (i in 1:ncols) { a<-table.element(a,names(selection[[3]][[1]]$coef)[i],header=TRUE) } a<-table.row.end(a) for (j in 1:nrows) { a<-table.row.start(a) mydum <- 'Estimates (' mydum <- paste(mydum,j) mydum <- paste(mydum,')') a<-table.element(a,mydum, header=TRUE) for (i in 1:ncols) { a<-table.element(a,round(selection[[1]][j,i],4)) } a<-table.row.end(a) a<-table.row.start(a) a<-table.element(a,'(p-val)', header=TRUE) for (i in 1:ncols) { mydum <- '(' mydum <- paste(mydum,round(selection[[2]][j,i],4),sep='') mydum <- paste(mydum,')') a<-table.element(a,mydum) } a<-table.row.end(a) } a<-table.end(a) table.save(a,file='mytable.tab') a <-table.start() a <- table.row.start(a) a <- table.element(a,'Menu of Residual Diagnostics',2,TRUE) a <- table.row.end(a) a <- table.row.start(a) a <- table.element(a,'Description',1,TRUE) a <- table.element(a,'Link',1,TRUE) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Histogram',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_histogram.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Central Tendency',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_centraltendency.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'QQ Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_fitdistrnorm.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Kernel Density Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_density.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Skewness/Kurtosis Test',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_skewness_kurtosis.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Skewness-Kurtosis Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_skewness_kurtosis_plot.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Harrell-Davis Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_harrell_davis.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Bootstrap Plot -- Central Tendency',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_bootstrapplot1.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Blocked Bootstrap Plot -- Central Tendency',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_bootstrapplot.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'(Partial) Autocorrelation Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_autocorrelation.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Spectral Analysis',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_spectrum.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Tukey lambda PPCC Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_tukeylambda.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <-table.element(a,'Box-Cox Normality Plot',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_boxcoxnorm.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a <- table.row.start(a) a <- table.element(a,'Summary Statistics',1,header=TRUE) a <- table.element(a,hyperlink( paste('https://supernova.wessa.net/rwasp_summary1.wasp?convertgetintopost=1&data=',paste(as.character(resid),sep='',collapse=' '),sep='') ,'Compute','Click here to examine the Residuals.'),1) a <- table.row.end(a) a<-table.end(a) table.save(a,file='mytable7.tab')
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Raw Output
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Computing time
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R Server
Big Analytics Cloud Computing Center
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